Information on the graphical user interface
In order to run our first Eye2Brain application, we have to create a new instance that, in our case, corresponds to one patient.
Firstly, the user has to click on "Experiments" then "Instances" and finally "Add a new one" in order to reach the web page depicted in Fig. 1. Then the application has to be selected and, in particular for the Eye2Brain applications, the user has the possiblity to choose between:
These applications are relevant in the clinical research and medical context. We provide however an advanced interface for developers and end-users who require a fine tuning of some advanced input parameters. The parameters marked advanced below are available only in the advanced interfaces associated with each level in the following applications
-
eye2brain-level-0-advanced -
eye2brain-level-1-advanced -
eye2brain-level-2-advanced
At this point all the inputs of the three different models are already filled with some default values in order to have always all the parameters specified. We present now the various input parameters that are available for the three different levels.
1. Level 0 - input parameters
Key name |
Brief description |
Default value |
Unit |
DBP |
Diastolic Blood Pressure |
69 |
\(mmHg\) |
SBP |
Systolic Blood Pressure |
116 |
\(mmHg\) |
HR |
Heart Rate |
69 |
\(bpm\) |
IOP |
IntraOcular Pressure |
17 |
\(mmHg\) |
RLTp |
RetroLaminar Tissue Pressure |
9.5 |
\(mmHg\) |
2. Level 1 - input parameters
Key name |
Brief description |
Default value |
Unit |
Advanced Interface |
DBP |
Diastolic Blood Pressure |
69 |
\(mmHg\) |
|
SBP |
Systolic Blood Pressure |
116 |
\(mmHg\) |
|
HR |
Heart Rate |
69 |
\(bpm\) |
|
IOP |
IntraOcular Pressure |
17 |
\(mmHg\) |
|
RLTp |
RetroLaminar Tissue Pressure |
9.5 |
\(mmHg\) |
|
CRVp |
Central Retinal Vein Pressure |
19 |
\(mmHg\) |
|
\(\kappa\) |
permeability coefficient |
0.015192 |
\(cm^3\: s\: Kg^{-1}\) |
[✔] |
3. Level 2 - input parameters
Key name |
Brief description |
Default value |
Unit |
Advanced Interface |
DBP |
Diastolic Blood Pressure |
69 |
\(mmHg\) |
|
SBP |
Systolic Blood Pressure |
116 |
\(mmHg\) |
|
HR |
Heart Rate |
69 |
\(bpm\) |
|
IOP |
IntraOcular Pressure |
17 |
\(mmHg\) |
|
RLTp |
RetroLaminar Tissue Pressure |
9.5 |
\(mmHg\) |
|
CRVp |
Central Retinal Vein Pressure |
19 |
\(mmHg\) |
|
CRAp |
Central Retinal Artery Pressure |
80 |
\(mmHg\) |
|
\(\kappa\) |
permeability coefficient |
0.015192 |
\(cm^3\: s\: Kg^{-1}\) |
[✔] |
\(\rho\) |
tissue density |
0.0011 |
\(Kg\:cm^{-3}\) |
[✔] |
\(\lambda\) |
Lamé first parameter |
5.88 |
\(GPa\) |
[✔] |
\(\mu\) |
Lamé second parameter |
0.12 |
\(GPa\) |
[✔] |
4. Advanced computational parameters
Key name |
Brief description |
Default value |
|
extra command line options |
|
|
maximum allowed time for run (minutes and seconds) |
00:30:00 |
|
partition to be used on the supercomputer |
thinnodes |
|
number of tasks to be used in parallel |
10 |
|
code name of the HPC machine to be used (set up in settings) |
FT2 |